CCES Unicamp

PGA: a Polyploid Gene Assembler

PGA was developed using PERL scripts for running in Linux system and integrates various software for read mapping, de novo assembling and scaffolding. PGA works with DNA reads and focuses on assembly gene regions, including exons, introns and promoters. PGA can be used mainly for plants, but can be applied to any organism that has a closely related species with sequenced genome.

Availability: http://www.lge.ibi.unicamp.br/pga

 

Related posts

Claudia Bauzer Medeiros Honoris Causa Paris Dauphine

escience

OmpCloud: Bridging the Gap between OpenMP and Cloud Computing

cces cces

Designing new quinoline-based organic photosensitizers for dye-sensitized solar cells (DSSC): a theoretical investigation

cces cces